Jmol icon

Jmol 13.0.9

Downloads :
Total: 100  |  
Product Version :
13.0.9
Producer :
License type :
Freeware
Size :
16.9 MB
Category :
November 28, 2012, 14:54
User Rating : (UNRATED)
OS Supported :
Windows 7
Windows Vista
Windows2003
WinXP
Windows2000

Jmol Information

Publisher's Description:

Java interactive web applet designed to display various 3D chemical information.

Jmol is a Java molecular viewer for three-dimensional chemical structures. Features include reading a variety of file types and output from quantum chemistry programs, and animation of multi-frame files and computed normal modes from quantum programs.

Features
* Free, open-source software licensed under the GNU Lesser General Public License
* Applet, Application, and Systems Integration Component
o The JmolApplet is a web browser applet that can be integrated into web pages. It is ideal for development of web-based courseware and web-accessible chemical databases. The JmolApplet provides an upgrade path for users of the Chime plug-in.
o The Jmol application is a standalone Java application that runs on the desktop.
o The JmolViewer can be integrated as a component into other Java applications.
* Multi-language
o Translated into multiple languages: Catalan (ca), Chinese (both zh_CN and zh_TW) Czech (cs), Dutch (nl), French (fr), German (de), Hungarian (hu), Italian (it), Korean (ko), Portuguese - Brazil (pt_BR), Spanish (es), Turkish (tr), (in addition to the native American English, en-US, and British English, en-GB).
o Automatically adopts the language of the user's operating system, if it is among the translations available. You can change to another language if desired.
o For up-to-date details or instructions for adding your language, see the Wiki.
* Cross-platform
o Windows
o Mac OS X
o Linux / Unix
* Supports all major web browsers: Internet Explorer, Mozilla and Firefox, Safari, Google Chrome, Opera, Konqueror, IceWeasel, ...
* High-performance 3D rendering with no hardware requirements
* File formats (see also the file formats section within Jmol Wiki):
MOL MDL / Elsevier / Symyx structure (classic version V2000)
V3000 MDL / Elsevier / Symyx structure (new version V3000)
SDF MDL / Elsevier / Symyx structure (multiple models)
CTFile MDL / Elsevier / Symyx chemical table (generic)
CIF Crystallographic Information File - standard from the International Union of Crystallography
mmCIF Macromolecular Crystallographic Information File - standard from the International Union of Crystallography
CML Chemical Markup Language
PDB Protein Data Bank - Research Collaboratory for Structural Bioinformatics
XYZ XYZ format, XMol file - Minnesota Supercomputer Institute
XYZ+vib XYZ format with added vibrational vector information
XYZ-FAH XYZ format for Folding@home
MOL2 Sybyl, Tripos
Alchemy Tripos
CSF Fujitsu CAChe chemical structure, now Fujitsu Sygress
GAMESS General Atomic and Molecular Electronic Structure System output (both US and UK variants) - Gordon Research Group, Iowa State University
Gaussian Gaussian 94/98/03 output - Gaussian, Inc.
Cube Gaussian, Inc.
Ghemical The Ghemical computational chemistry package
MM1GP Ghemical molecular mechanics file
HIN HIN / HIV files from HyperChem - Hypercube, Inc.
Jaguar Schrodinger, LLC
MOLPRO Molpro output
MOPAC MOPAC 93/97/2002 output (public domain)
MGF MOPAC 2007 (v.7.101) graphf output (public domain)
NWCHEM NWChem output - Pacific Northwest National Laboratory
odydata Odyssey data - WaveFunction, Inc.
xodydata Odyssey XML data - WaveFunction, Inc.
QOUT Q-Chem, Inc.
SHELX Structural Chemistry Department, University of Gttingen (Germany)
SMOL Spartan data - Wavefunction, Inc.
spinput Spartan data - Wavefunction, Inc.
GRO Gromos87 format from GROMACS
PQR Modified pdb format including charge and radius
Amber The Amber package of molecular simulation programs
JME Java Molecular Editor - Peter Ertl
CASTEP The CASTEP software package, uses density functional theory
FHI-aims Full-potential / all-electron electronic structure theory with local orbitals - Fritz-Haber-Institut der Max-Planck-Gesellschaft
VASP VASP / VAMP / Vienna ab-initio simulation package
DGrid Miroslav Kohout, Max-Planck Institute
ADF ADF output - Amsterdam Density Functional
XSD Accelrys Materials Studio
AGL ArgusLab
DFT Wien2k
AMPAC AMPAC output - Semichem, Inc.
WebMO WebMO interface to computational chemistry packages
Molden Electron density / molecular orbitals
PSI3 Output files from the PSI3 suite of quantum chemical programs
CRYSTAL Output files from CRYSTAL, a computational tool for solid state chemistry and physics. Theoretical Chemistry Group, Univ. Torino, Italy.
* Files which are compressed with gzip will automatically be decompressed
* Animations
* Vibrations
* Surfaces
* Orbitals
* Support for unit cell and symmetry operations
* Schematic shapes for secondary structures in biomolecules
* Measurements
o distance
o angle
o torsion angle
* Support for RasMol/Chime scripting language
* JavaScript support library (Jmol.js)
* Exports to jpg, png, gif, ppm, pdf, POV-Ray, Gaussian, Maya, vrml, x3d, idtf, web page.
* For more details, see the history of development.

Requirements:

Java Runtime Environment

Version History

Software Versions

  Date added
  Size
  Nov 28, 2012
  16.9 MB
  Jul 5, 2012
  16.9 MB
  May 18, 2012
  16.9 MB
  Jul 6, 2011
  15.2 MB
  Feb 8, 2011
  15.2 MB

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Jmol 100% CLEAN Certification

100% Clean Award for Jmol
RoSoftDownload.com team has tested Jmol against viruses, spyware, adware, trojan, backdoors and was found to be 100% clean of any form of malware..
Our editors will test this application periodically to assure that it remains clean.
Click the link below to view the entire antivirus report.


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